Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Clp1Q99LI9 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.15□□□□□ -1.11
Clp1Q99LI9 AC138284.3-201ENSMUST00000217345 4663 ntBASIC8.15□□□□□ -1.11
Clp1Q99LI9 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
Clp1Q99LI9 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm43311-201ENSMUST00000200016 2377 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Usp3-202ENSMUST00000098613 2797 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm25760-201ENSMUST00000103989 132 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm5228-201ENSMUST00000117186 357 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm14879-201ENSMUST00000117308 507 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm13229-201ENSMUST00000118238 340 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm15709-201ENSMUST00000118354 213 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm14712-201ENSMUST00000120195 772 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm11385-201ENSMUST00000121513 570 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm23657-201ENSMUST00000122623 294 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm23111-201ENSMUST00000122652 105 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm24532-201ENSMUST00000157951 286 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Samd15-201ENSMUST00000169669 1194 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm27219-201ENSMUST00000184633 742 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm44356-201ENSMUST00000196731 111 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm42963-201ENSMUST00000202943 1217 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm18907-201ENSMUST00000209719 932 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm31711-201ENSMUST00000220687 196 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 AC154552.5-201ENSMUST00000222352 207 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 AC117797.2-201ENSMUST00000224419 531 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm37569-201ENSMUST00000192111 1722 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm16536-201ENSMUST00000162209 1589 ntBASIC8.14□□□□□ -1.11
Clp1Q99LI9 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Clp1Q99LI9 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm44437-201ENSMUST00000203832 4038 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm43776-201ENSMUST00000199729 2914 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm37649-201ENSMUST00000192079 2232 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 n-R5s1-201ENSMUST00000101925 119 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Clp1Q99LI9 Gm14985-201ENSMUST00000118693 786 ntBASIC8.13□□□□□ -1.11
Clp1Q99LI9 H3f3c-201ENSMUST00000119459 411 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms