Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc60Q8C4J0 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.74□□□□□ -1.01
Ccdc60Q8C4J0 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc60Q8C4J0 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm13877-201ENSMUST00000120614 417 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm26321-201ENSMUST00000157740 242 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm6434-201ENSMUST00000163316 372 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm27185-201ENSMUST00000184296 247 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Mir6987-201ENSMUST00000184789 73 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm45279-201ENSMUST00000210315 391 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm6887-201ENSMUST00000080945 482 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Gm43789-201ENSMUST00000199275 2472 ntBASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc60Q8C4J0 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm11590-201ENSMUST00000118999 1455 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm22256-201ENSMUST00000102291 107 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm11689-201ENSMUST00000120766 302 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm25556-201ENSMUST00000158077 144 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm24545-201ENSMUST00000158651 85 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm27156-201ENSMUST00000184589 754 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm37383-201ENSMUST00000191750 745 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm23054-201ENSMUST00000082804 162 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ccdc60Q8C4J0 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
Ccdc60Q8C4J0 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc60Q8C4J0 Gm25717-201ENSMUST00000158631 353 ntBASIC8.71□□□□□ -1.02
Ccdc60Q8C4J0 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc60Q8C4J0 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Ccdc60Q8C4J0 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc60Q8C4J0 Gm29141-201ENSMUST00000190357 882 ntBASIC8.71□□□□□ -1.02
Ccdc60Q8C4J0 Gm17822-201ENSMUST00000204307 351 ntBASIC8.71□□□□□ -1.02
Ccdc60Q8C4J0 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Ccdc60Q8C4J0 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.71□□□□□ -1.02
Ccdc60Q8C4J0 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms