Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm7412-201ENSMUST00000191692 605 ntBASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Trbv9-201ENSMUST00000194494 290 ntBASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Gm36932-201ENSMUST00000195226 929 ntBASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Gm38170-201ENSMUST00000195404 816 ntBASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
Casc4Q6P2L7 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Casc4Q6P2L7 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Casc4Q6P2L7 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.09□□□□□ -1.28
Casc4Q6P2L7 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm13798-201ENSMUST00000118285 139 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm15153-201ENSMUST00000119867 274 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm26480-201ENSMUST00000122619 297 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm22702-201ENSMUST00000175372 69 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm23018-201ENSMUST00000177928 109 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm27866-201ENSMUST00000184459 171 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm30517-201ENSMUST00000197350 772 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm17950-201ENSMUST00000214617 646 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm10126-201ENSMUST00000221732 168 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 AC133598.4-201ENSMUST00000224577 454 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Snora21-201ENSMUST00000082967 137 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Mir484-201ENSMUST00000093566 67 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.08□□□□□ -1.28
Casc4Q6P2L7 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Gm44676-201ENSMUST00000208520 3055 ntBASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Casc4Q6P2L7 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms