Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Cldn18P56857 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.42
Cldn18P56857 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
Cldn18P56857 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cldn18P56857 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cldn18P56857 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.21□□□□□ -1.42
Cldn18P56857 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cldn18P56857 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.21□□□□□ -1.42
Cldn18P56857 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.21□□□□□ -1.42
Cldn18P56857 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cldn18P56857 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cldn18P56857 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cldn18P56857 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm13735-201ENSMUST00000120217 670 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm11581-201ENSMUST00000122024 763 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm16330-201ENSMUST00000128324 297 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.2□□□□□ -1.42
Cldn18P56857 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm22915-201ENSMUST00000157615 136 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm23891-201ENSMUST00000158114 138 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.2□□□□□ -1.42
Cldn18P56857 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm25574-201ENSMUST00000175245 249 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm9167-201ENSMUST00000182469 962 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cldn18P56857 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm29357-201ENSMUST00000186877 698 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm29470-201ENSMUST00000188007 696 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.2□□□□□ -1.42
Cldn18P56857 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm44252-201ENSMUST00000204187 330 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm44147-201ENSMUST00000204658 94 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm9357-201ENSMUST00000207138 805 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm46311-201ENSMUST00000217971 203 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cldn18P56857 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cldn18P56857 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cldn18P56857 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cldn18P56857 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.2□□□□□ -1.42
Cldn18P56857 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms