Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm3549-201ENSMUST00000203873 794 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm44565-201ENSMUST00000208194 269 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.48□□□□□ -1.21
Shmt1P50431 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.48□□□□□ -1.21
Shmt1P50431 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 AC174797.4-201ENSMUST00000225510 347 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Glycam1-204ENSMUST00000228895 641 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
Shmt1P50431 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Shmt1P50431 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
Shmt1P50431 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Shmt1P50431 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 Mir697-201ENSMUST00000102316 109 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm7821-201ENSMUST00000117111 788 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm13156-201ENSMUST00000118348 321 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm23888-201ENSMUST00000122690 253 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.47□□□□□ -1.21
Shmt1P50431 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm22533-201ENSMUST00000158821 274 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm28413-201ENSMUST00000189369 291 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm5154-201ENSMUST00000203971 399 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm43974-201ENSMUST00000205080 684 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 AC153544.1-201ENSMUST00000217988 400 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 AC133598.3-204ENSMUST00000224260 767 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm9985-201ENSMUST00000044101 510 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Shmt1P50431 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm22865-201ENSMUST00000083949 214 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Gm5446-201ENSMUST00000091762 784 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Shmt1P50431 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.47□□□□□ -1.21
Shmt1P50431 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Shmt1P50431 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Shmt1P50431 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Shmt1P50431 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Shmt1P50431 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Shmt1P50431 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Shmt1P50431 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.46□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms