Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC5.71□□□□□ -1.49
Cdx1P18111 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.71□□□□□ -1.49
Cdx1P18111 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
Cdx1P18111 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm12346-201ENSMUST00000121455 2255 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdx1P18111 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx1P18111 n-R5s9-201ENSMUST00000104432 117 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm24986-201ENSMUST00000104452 132 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm14756-201ENSMUST00000116395 240 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm9836-201ENSMUST00000117132 216 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm14485-201ENSMUST00000119489 493 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm14202-201ENSMUST00000120121 311 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm15160-201ENSMUST00000120553 907 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm371-201ENSMUST00000142240 1245 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC5.71□□□□□ -1.5
Cdx1P18111 Mir1981-201ENSMUST00000157934 82 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm9141-201ENSMUST00000159355 1007 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC5.71□□□□□ -1.5
Cdx1P18111 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC5.71□□□□□ -1.5
Cdx1P18111 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm26959-201ENSMUST00000182376 978 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Cdx1P18111 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm9710-201ENSMUST00000198053 499 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm32899-201ENSMUST00000219694 207 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 AC163667.2-201ENSMUST00000223769 791 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 AC241621.1-201ENSMUST00000224499 430 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 AC165287.1-201ENSMUST00000224985 178 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 CT009728.1-201ENSMUST00000225228 1050 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 AC152940.1-201ENSMUST00000226504 139 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx1P18111 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Cdx1P18111 Olfr120-201ENSMUST00000077498 993 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx1P18111 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx1P18111 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx1P18111 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx1P18111 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Cdx1P18111 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Cdx1P18111 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx1P18111 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.71□□□□□ -1.5
Cdx1P18111 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.71□□□□□ -1.5
Cdx1P18111 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC5.71□□□□□ -1.5
Cdx1P18111 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx1P18111 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdx1P18111 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdx1P18111 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm6823-201ENSMUST00000120791 1839 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Cdx1P18111 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm4914-201ENSMUST00000119757 459 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm6620-201ENSMUST00000120113 715 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm8577-201ENSMUST00000122420 986 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC5.7□□□□□ -1.5
Cdx1P18111 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC5.7□□□□□ -1.5
Cdx1P18111 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC5.7□□□□□ -1.5
Cdx1P18111 Gm4835-201ENSMUST00000155839 972 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Mir1968-201ENSMUST00000157429 68 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm17047-201ENSMUST00000167709 430 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm7502-201ENSMUST00000169235 733 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm23187-201ENSMUST00000175746 86 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm18752-201ENSMUST00000192876 608 ntBASIC5.7□□□□□ -1.5
Cdx1P18111 Gm5541-201ENSMUST00000193248 1113 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms