Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm15903-202ENSMUST00000199631 3518 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Mir7653-201ENSMUST00000184358 61 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm37637-201ENSMUST00000195540 1256 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm44342-201ENSMUST00000196874 129 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm44383-201ENSMUST00000198940 129 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 AC126554.3-201ENSMUST00000223131 493 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm29486-201ENSMUST00000088648 372 ntBASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC5.74□□□□□ -1.49
Prpf8Q99PV0 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm37161-201ENSMUST00000191994 2697 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm43534-201ENSMUST00000197685 2853 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm12959-201ENSMUST00000119396 403 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm11553-201ENSMUST00000120682 240 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Mir1953-201ENSMUST00000157866 89 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm23386-201ENSMUST00000158585 144 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm38022-201ENSMUST00000191762 403 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm10126-201ENSMUST00000221732 168 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm37570-201ENSMUST00000195411 3106 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm43429-201ENSMUST00000197889 2251 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm45407-201ENSMUST00000209499 3676 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm25785-201ENSMUST00000104129 125 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm22284-201ENSMUST00000104132 132 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm3810-201ENSMUST00000122413 476 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm43905-201ENSMUST00000204516 204 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Gm2754-201ENSMUST00000223383 589 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 AC164294.1-201ENSMUST00000224682 688 ntBASIC5.73□□□□□ -1.49
Prpf8Q99PV0 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf8Q99PV0 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf8Q99PV0 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf8Q99PV0 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf8Q99PV0 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf8Q99PV0 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms