Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Gm45714-201ENSMUST00000211466 2722 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Cyp2c37-201ENSMUST00000049178 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Gm14797-201ENSMUST00000119378 1480 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Gm6558-201ENSMUST00000191934 1973 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC7.83□□□□□ -1.16
Sox1P53783 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Gm11902-201ENSMUST00000118849 270 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Gm11891-201ENSMUST00000121241 619 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Gm14413-201ENSMUST00000122158 408 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Sox1P53783 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.83□□□□□ -1.16
Sox1P53783 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC7.83□□□□□ -1.16
Sox1P53783 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Atp2b4-208ENSMUST00000167348 243 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Sox1P53783 Mir7674-201ENSMUST00000184964 63 ntBASIC7.83□□□□□ -1.16
Sox1P53783 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.83□□□□□ -1.16
Sox1P53783 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.83□□□□□ -1.16
Sox1P53783 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC7.83□□□□□ -1.16
Sox1P53783 Gm19170-201ENSMUST00000212440 1084 ntBASIC7.83□□□□□ -1.16
Sox1P53783 AC152922.1-201ENSMUST00000216518 1232 ntBASIC7.83□□□□□ -1.16
Sox1P53783 AC162934.2-201ENSMUST00000221451 249 ntBASIC7.83□□□□□ -1.16
Sox1P53783 AC116395.1-201ENSMUST00000225480 1143 ntBASIC7.83□□□□□ -1.16
Sox1P53783 AC117656.3-204ENSMUST00000225656 859 ntBASIC7.83□□□□□ -1.16
Sox1P53783 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.83□□□□□ -1.16
Sox1P53783 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Sox1P53783 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Sox1P53783 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Olfr687-201ENSMUST00000098154 938 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Sox1P53783 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
Sox1P53783 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC7.83□□□□□ -1.16
Sox1P53783 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Gm10513-201ENSMUST00000194203 6468 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
Sox1P53783 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Sox1P53783 Gm15109-201ENSMUST00000133085 2026 ntBASIC7.83□□□□□ -1.16
Sox1P53783 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Sox1P53783 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sox1P53783 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Mirg-212ENSMUST00000183144 3797 ntTSL 5 BASIC7.82□□□□□ -1.16
Sox1P53783 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Sox1P53783 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Sox1P53783 Gm2178-201ENSMUST00000104927 357 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Sox1P53783 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Gm12468-201ENSMUST00000116189 404 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm9432-201ENSMUST00000117810 759 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC7.82□□□□□ -1.16
Sox1P53783 Gm12202-201ENSMUST00000121196 811 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.82□□□□□ -1.16
Sox1P53783 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Gm24960-201ENSMUST00000157923 90 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm23387-201ENSMUST00000158586 107 ntBASIC7.82□□□□□ -1.16
Sox1P53783 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm16456-201ENSMUST00000174431 920 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm5871-201ENSMUST00000176461 718 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm24754-201ENSMUST00000177997 107 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.82□□□□□ -1.16
Sox1P53783 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Sox1P53783 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.82□□□□□ -1.16
Sox1P53783 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sox1P53783 Gm37463-201ENSMUST00000193819 796 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.82□□□□□ -1.16
Sox1P53783 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC7.82□□□□□ -1.16
Sox1P53783 Gm44138-201ENSMUST00000204939 271 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC7.82□□□□□ -1.16
Sox1P53783 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms