Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Rnu11-201ENSMUST00000104135 134 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm15164-201ENSMUST00000122203 271 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Gm11341-201ENSMUST00000122316 447 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Mir1953-201ENSMUST00000157866 89 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Gm20530-201ENSMUST00000174261 254 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Gm44162-201ENSMUST00000203543 544 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm19324-201ENSMUST00000213229 1169 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 AC154757.2-201ENSMUST00000228885 743 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Col2a1P28481 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col2a1P28481 Gm43679-201ENSMUST00000197051 3677 ntBASIC7.85□□□□□ -1.15
Col2a1P28481 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Col2a1P28481 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.84□□□□□ -1.15
Col2a1P28481 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.84□□□□□ -1.15
Col2a1P28481 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Gm15621-201ENSMUST00000119162 364 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Gm12369-201ENSMUST00000121343 942 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Gm3810-201ENSMUST00000122413 476 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Gm4997-201ENSMUST00000154056 360 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Gm23276-201ENSMUST00000157913 138 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Gm22428-201ENSMUST00000158554 132 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Col2a1P28481 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.84□□□□□ -1.15
Col2a1P28481 Gm43576-201ENSMUST00000197937 871 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.84□□□□□ -1.15
Col2a1P28481 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Col2a1P28481 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Col2a1P28481 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Gm22581-201ENSMUST00000083735 136 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Col2a1P28481 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.84□□□□□ -1.15
Col2a1P28481 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Col2a1P28481 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Col2a1P28481 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Col2a1P28481 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col2a1P28481 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.84□□□□□ -1.16
Col2a1P28481 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.84□□□□□ -1.16
Col2a1P28481 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.84□□□□□ -1.16
Col2a1P28481 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Col2a1P28481 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.16
Col2a1P28481 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Col2a1P28481 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Gm37648-201ENSMUST00000192072 2563 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 Gm22284-201ENSMUST00000104132 132 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 Gm26422-201ENSMUST00000104276 132 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 Gm25342-201ENSMUST00000157459 122 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 Gm43383-201ENSMUST00000195981 469 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.83□□□□□ -1.16
Col2a1P28481 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Gm24032-201ENSMUST00000083932 159 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Col2a1P28481 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Col2a1P28481 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.83□□□□□ -1.16
Col2a1P28481 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
Col2a1P28481 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
Col2a1P28481 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Col2a1P28481 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms