Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm28400-201ENSMUST00000191332 380 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm37369-201ENSMUST00000194179 615 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm43436-201ENSMUST00000199308 147 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm40319-201ENSMUST00000199785 481 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm6850-201ENSMUST00000210031 530 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 AC155259.1-201ENSMUST00000214794 477 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdx1P18111 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdx1P18111 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdx1P18111 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 AC123705.1-201ENSMUST00000222512 2058 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm40778-201ENSMUST00000217825 1344 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdx1P18111 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cdx1P18111 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Gm3742-201ENSMUST00000220907 1391 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Cdx1P18111 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdx1P18111 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cdx1P18111 Mir290a-201ENSMUST00000104627 83 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC5.72□□□□□ -1.49
Cdx1P18111 Gm22152-201ENSMUST00000116966 125 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm11893-201ENSMUST00000117829 491 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm13006-201ENSMUST00000118683 214 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm15786-201ENSMUST00000121079 450 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm14587-201ENSMUST00000121714 658 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdx1P18111 Gm22224-201ENSMUST00000157357 93 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm24422-201ENSMUST00000157800 119 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm26269-201ENSMUST00000180144 126 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Zfp572-202ENSMUST00000184208 1078 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm8004-201ENSMUST00000187782 617 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC5.72□□□□□ -1.49
Cdx1P18111 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Gm4785-201ENSMUST00000191025 751 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm38170-201ENSMUST00000195404 816 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm3103-201ENSMUST00000198073 752 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm44861-201ENSMUST00000208325 1220 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cdx1P18111 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC5.72□□□□□ -1.49
Cdx1P18111 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC5.72□□□□□ -1.49
Cdx1P18111 AC126939.4-201ENSMUST00000225360 743 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 AC124196.1-201ENSMUST00000225970 1032 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdx1P18111 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cdx1P18111 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Cdx1P18111 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Gm6166-201ENSMUST00000098689 409 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Cdx1P18111 AC138765.2-202ENSMUST00000228418 3435 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdx1P18111 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdx1P18111 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.72□□□□□ -1.49
Cdx1P18111 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cdx1P18111 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cdx1P18111 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Cdx1P18111 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms