Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm17908-201ENSMUST00000205552 1256 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 AC140930.1-201ENSMUST00000221889 389 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 AC123656.1-201ENSMUST00000227121 581 ntBASIC8.35□□□□□ -1.07
Col4a1P02463 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Col4a1P02463 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col4a1P02463 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col4a1P02463 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Col4a1P02463 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col4a1P02463 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Col4a1P02463 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm4997-201ENSMUST00000154056 360 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 Gm16164-201ENSMUST00000160078 468 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Col4a1P02463 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Mir7072-201ENSMUST00000184542 60 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm18952-201ENSMUST00000194471 846 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 Gm30708-201ENSMUST00000202183 312 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 AC131795.1-201ENSMUST00000219632 426 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC8.34□□□□□ -1.07
Col4a1P02463 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 Mir196a-1-201ENSMUST00000083612 102 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm37633-201ENSMUST00000192858 2700 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Col4a1P02463 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.34□□□□□ -1.07
Col4a1P02463 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Col4a1P02463 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC8.34□□□□□ -1.08
Col4a1P02463 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC8.34□□□□□ -1.08
Col4a1P02463 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.34□□□□□ -1.08
Col4a1P02463 Gm26079-201ENSMUST00000104066 133 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 Gm12643-201ENSMUST00000116078 374 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 Gm14054-201ENSMUST00000120744 704 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC8.34□□□□□ -1.08
Col4a1P02463 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
Col4a1P02463 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Col4a1P02463 Gm4152-201ENSMUST00000172675 259 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC8.34□□□□□ -1.08
Col4a1P02463 Gm43176-201ENSMUST00000199653 2989 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 Igkv4-73-201ENSMUST00000199760 358 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC8.34□□□□□ -1.08
Col4a1P02463 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC8.34□□□□□ -1.08
Col4a1P02463 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Col4a1P02463 Gm17950-201ENSMUST00000214617 646 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 Gm5831-201ENSMUST00000216016 1209 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 AC117769.2-201ENSMUST00000224612 469 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 AC105407.1-201ENSMUST00000225684 614 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 AC164426.1-201ENSMUST00000225745 929 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 AC113031.1-201ENSMUST00000227400 432 ntBASIC8.34□□□□□ -1.08
Col4a1P02463 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Col4a1P02463 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Col4a1P02463 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Col4a1P02463 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col4a1P02463 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col4a1P02463 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Col4a1P02463 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms