Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim11Q99PQ2 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm11483-201ENSMUST00000119839 247 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm15224-201ENSMUST00000120501 388 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm25413-201ENSMUST00000158544 312 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm29072-201ENSMUST00000191149 678 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm28060-201ENSMUST00000191554 189 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm43542-201ENSMUST00000199505 379 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Clec2j-202ENSMUST00000203658 606 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm44988-201ENSMUST00000203835 1161 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm18645-201ENSMUST00000209593 651 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Platr25-208ENSMUST00000222602 939 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm25586-201ENSMUST00000082499 112 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim11Q99PQ2 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm37262-201ENSMUST00000192816 1818 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm26424-201ENSMUST00000122530 104 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms