Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 AC153526.3-201ENSMUST00000220145 2183 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Rai14-202ENSMUST00000169385 4759 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm16559-201ENSMUST00000160080 1564 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 8030453O22Rik-202ENSMUST00000135363 1506 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm26384-201ENSMUST00000102183 110 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Igkv3-3-201ENSMUST00000103402 359 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Igkv3-1-201ENSMUST00000103404 359 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 n-R5s165-201ENSMUST00000104074 100 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm24985-201ENSMUST00000104455 129 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm9836-201ENSMUST00000117132 216 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm6964-201ENSMUST00000117206 437 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm12841-201ENSMUST00000128263 338 ntTSL 2 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm22945-201ENSMUST00000158557 157 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm24734-201ENSMUST00000158860 262 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Anp32e-207ENSMUST00000170125 413 ntTSL 3 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm17919-201ENSMUST00000173344 312 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm28865-201ENSMUST00000187685 723 ntTSL 3 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm38135-201ENSMUST00000195068 502 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm36953-201ENSMUST00000195295 268 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm43711-201ENSMUST00000195994 373 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Igkv3-6-201ENSMUST00000196007 342 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm19185-201ENSMUST00000196365 643 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm9245-201ENSMUST00000200528 983 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm43850-201ENSMUST00000202021 578 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm45497-201ENSMUST00000211701 740 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Rps25-204ENSMUST00000216076 393 ntTSL 3 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 AC156164.1-201ENSMUST00000216958 225 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm29154-249ENSMUST00000217020 847 ntTSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 CT025533.1-201ENSMUST00000227485 706 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm7984-201ENSMUST00000060640 538 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm9246-201ENSMUST00000117587 3490 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 C6-201ENSMUST00000022788 2447 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm36963-201ENSMUST00000193506 2324 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC8.41□□□□□ -1.06
Pcdhb3Q91XZ7 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Gm11232-201ENSMUST00000084489 1680 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 C1galt1c1-201ENSMUST00000058265 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Gm8165-201ENSMUST00000095981 1404 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Etfbkmt-203ENSMUST00000111548 1398 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Gm19031-201ENSMUST00000176280 1365 ntBASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb3Q91XZ7 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms