Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Mir6357-201ENSMUST00000184246 104 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm29354-201ENSMUST00000187613 696 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm8101-201ENSMUST00000192796 478 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm37526-201ENSMUST00000194640 619 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm10416-201ENSMUST00000197379 645 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm45497-201ENSMUST00000211701 740 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 A1cf-203ENSMUST00000224400 1204 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 AV026068-229ENSMUST00000225516 595 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm2840-201ENSMUST00000048361 411 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm9800-201ENSMUST00000052615 336 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Nup88Q8CEC0 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.21□□□□□ -1.09
Nup88Q8CEC0 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.21□□□□□ -1.09
Nup88Q8CEC0 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Nup88Q8CEC0 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Nup88Q8CEC0 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Nup88Q8CEC0 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Nup88Q8CEC0 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Nup88Q8CEC0 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Nup88Q8CEC0 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Nup88Q8CEC0 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Nup88Q8CEC0 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Nup88Q8CEC0 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm22671-201ENSMUST00000104420 134 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm13798-201ENSMUST00000118285 139 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm15007-201ENSMUST00000119982 710 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm15188-201ENSMUST00000121264 704 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm2709-201ENSMUST00000142979 350 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm25640-201ENSMUST00000175378 125 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm28416-201ENSMUST00000188334 292 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm9114-201ENSMUST00000188558 997 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm23011-202ENSMUST00000197855 275 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm21054-201ENSMUST00000203981 380 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm45739-201ENSMUST00000213094 388 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 AC161275.1-201ENSMUST00000224668 208 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Nup88Q8CEC0 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 AC140280.1-201ENSMUST00000227826 1847 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm13156-201ENSMUST00000118348 321 ntBASIC8.2□□□□□ -1.1
Nup88Q8CEC0 Gm8812-201ENSMUST00000118496 412 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms