Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm37334-201ENSMUST00000192325 2938 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm39041-201ENSMUST00000205557 3902 ntBASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim47Q8C0E3 Gm43800-201ENSMUST00000201868 2731 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm42692-201ENSMUST00000199482 2833 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm24373-201ENSMUST00000104393 132 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm15047-201ENSMUST00000118891 454 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm6568-201ENSMUST00000122274 697 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm15275-201ENSMUST00000154752 347 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm8304-201ENSMUST00000185744 584 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm28980-201ENSMUST00000187877 219 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm21923-201ENSMUST00000188455 696 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm29195-201ENSMUST00000189038 379 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm43350-201ENSMUST00000196382 711 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm9236-201ENSMUST00000196892 587 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm42818-201ENSMUST00000198869 987 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm9497-201ENSMUST00000199908 538 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm42965-201ENSMUST00000201254 250 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm19254-201ENSMUST00000204828 294 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 CT573422.1-201ENSMUST00000216655 405 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 AC122360.1-201ENSMUST00000217737 624 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 AC192334.2-201ENSMUST00000223087 1091 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 AC124397.1-201ENSMUST00000224296 653 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.74□□□□□ -1.01
Trim47Q8C0E3 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim47Q8C0E3 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms