Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC9.39□□□□□ -0.91
Nphp4P59240 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nphp4P59240 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC9.38□□□□□ -0.91
Nphp4P59240 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Gm44863-201ENSMUST00000207613 1422 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC9.38□□□□□ -0.91
Nphp4P59240 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Nphp4P59240 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Gm14762-201ENSMUST00000105109 1771 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
Nphp4P59240 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Gm15216-201ENSMUST00000118058 277 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 Gm15712-201ENSMUST00000120369 1156 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC9.38□□□□□ -0.91
Nphp4P59240 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC9.38□□□□□ -0.91
Nphp4P59240 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC9.38□□□□□ -0.91
Nphp4P59240 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC9.38□□□□□ -0.91
Nphp4P59240 Gm1969-201ENSMUST00000198125 1220 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC9.38□□□□□ -0.91
Nphp4P59240 Gm7769-201ENSMUST00000212900 933 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Nphp4P59240 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nphp4P59240 AC139750.1-201ENSMUST00000223962 1300 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 Gm3555-201ENSMUST00000160287 1395 ntBASIC9.38□□□□□ -0.91
Nphp4P59240 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Gm44652-201ENSMUST00000208648 2854 ntBASIC9.37□□□□□ -0.91
Nphp4P59240 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC9.37□□□□□ -0.91
Nphp4P59240 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 AC156645.1-201ENSMUST00000223066 5194 ntBASIC9.37□□□□□ -0.91
Nphp4P59240 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC9.37□□□□□ -0.91
Nphp4P59240 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC9.37□□□□□ -0.91
Nphp4P59240 Mir1900-201ENSMUST00000122714 78 ntBASIC9.37□□□□□ -0.91
Nphp4P59240 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Nphp4P59240 Gm6726-201ENSMUST00000172786 681 ntBASIC9.37□□□□□ -0.91
Nphp4P59240 Gm27152-201ENSMUST00000183828 99 ntBASIC9.37□□□□□ -0.91
Nphp4P59240 Gm44111-201ENSMUST00000204649 399 ntBASIC9.37□□□□□ -0.91
Nphp4P59240 Gm44163-201ENSMUST00000205140 475 ntBASIC9.37□□□□□ -0.91
Nphp4P59240 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Nphp4P59240 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC9.37□□□□□ -0.91
Nphp4P59240 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Nphp4P59240 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC9.37□□□□□ -0.91
Nphp4P59240 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC9.37□□□□□ -0.91
Nphp4P59240 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nphp4P59240 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nphp4P59240 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nphp4P59240 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC9.36□□□□□ -0.91
Nphp4P59240 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Gm12451-201ENSMUST00000121636 633 ntBASIC9.36□□□□□ -0.91
Nphp4P59240 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Gm23276-201ENSMUST00000157913 138 ntBASIC9.36□□□□□ -0.91
Nphp4P59240 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Gm4904-201ENSMUST00000178243 1195 ntBASIC9.36□□□□□ -0.91
Nphp4P59240 Gm3841-201ENSMUST00000191399 451 ntBASIC9.36□□□□□ -0.91
Nphp4P59240 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
Nphp4P59240 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nphp4P59240 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC9.36□□□□□ -0.91
Nphp4P59240 CT025579.4-201ENSMUST00000224598 627 ntBASIC9.36□□□□□ -0.91
Nphp4P59240 AC105324.1-201ENSMUST00000227844 386 ntBASIC9.36□□□□□ -0.91
Nphp4P59240 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Nphp4P59240 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Nphp4P59240 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms