Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Tpm1P58771 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Tpm1P58771 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Tpm1P58771 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC7.64□□□□□ -1.19
Tpm1P58771 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Gm16026-205ENSMUST00000162923 641 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
Tpm1P58771 Gm20549-201ENSMUST00000174804 429 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Gm26570-201ENSMUST00000180672 342 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Gm29354-201ENSMUST00000187613 696 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.64□□□□□ -1.19
Tpm1P58771 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC7.64□□□□□ -1.19
Tpm1P58771 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.64□□□□□ -1.19
Tpm1P58771 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Tpm1P58771 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Tpm1P58771 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.64□□□□□ -1.19
Tpm1P58771 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Gm5316-201ENSMUST00000050391 270 ntBASIC7.64□□□□□ -1.19
Tpm1P58771 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Tpm1P58771 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.64□□□□□ -1.19
Tpm1P58771 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.64□□□□□ -1.19
Tpm1P58771 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Tpm1P58771 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Tpm1P58771 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Tpm1P58771 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Tpm1P58771 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm12740-201ENSMUST00000118794 308 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Gm16248-201ENSMUST00000124238 243 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm25437-201ENSMUST00000158282 132 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm29072-201ENSMUST00000191149 678 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Gm37729-201ENSMUST00000194761 1172 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Gm43160-201ENSMUST00000196453 421 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Gm7631-201ENSMUST00000196935 1100 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Gm42734-201ENSMUST00000201656 878 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Tpm1P58771 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm18619-201ENSMUST00000222722 1147 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Tpm1P58771 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Tpm1P58771 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Tpm1P58771 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.63□□□□□ -1.19
Tpm1P58771 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Tpm1P58771 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Tpm1P58771 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Tpm1P58771 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.63□□□□□ -1.19
Tpm1P58771 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 141 ms