Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Msh6P54276 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.9□□□□□ -0.98
Msh6P54276 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Msh6P54276 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Msh6P54276 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.9□□□□□ -0.99
Msh6P54276 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.9□□□□□ -0.99
Msh6P54276 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Msh6P54276 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.89□□□□□ -0.99
Msh6P54276 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Msh6P54276 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.89□□□□□ -0.99
Msh6P54276 Gm43612-201ENSMUST00000196087 3207 ntBASIC8.89□□□□□ -0.99
Msh6P54276 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Msh6P54276 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Msh6P54276 Gm13006-201ENSMUST00000118683 214 ntBASIC8.89□□□□□ -0.99
Msh6P54276 Gm7658-201ENSMUST00000119064 1124 ntBASIC8.89□□□□□ -0.99
Msh6P54276 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC8.89□□□□□ -0.99
Msh6P54276 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC8.89□□□□□ -0.99
Msh6P54276 Gm20454-201ENSMUST00000172713 221 ntBASIC8.89□□□□□ -0.99
Msh6P54276 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC8.89□□□□□ -0.99
Msh6P54276 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.89□□□□□ -0.99
Msh6P54276 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC8.89□□□□□ -0.99
Msh6P54276 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.89□□□□□ -0.99
Msh6P54276 Gm45485-201ENSMUST00000211229 357 ntBASIC8.89□□□□□ -0.99
Msh6P54276 AC073562.1-201ENSMUST00000222117 401 ntBASIC8.89□□□□□ -0.99
Msh6P54276 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.89□□□□□ -0.99
Msh6P54276 AC154757.2-201ENSMUST00000228885 743 ntBASIC8.89□□□□□ -0.99
Msh6P54276 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Msh6P54276 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Msh6P54276 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.89□□□□□ -0.99
Msh6P54276 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Msh6P54276 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Msh6P54276 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Msh6P54276 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Msh6P54276 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Msh6P54276 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Msh6P54276 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC8.88□□□□□ -0.99
Msh6P54276 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC8.88□□□□□ -0.99
Msh6P54276 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Gm11462-201ENSMUST00000117749 562 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Gm14375-201ENSMUST00000119490 855 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Gm24176-201ENSMUST00000158928 121 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Gm22990-201ENSMUST00000175427 89 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Gm18952-201ENSMUST00000194471 846 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Gm38840-201ENSMUST00000204716 843 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Gm38574-201ENSMUST00000211855 640 ntBASIC8.88□□□□□ -0.99
Msh6P54276 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.88□□□□□ -0.99
Msh6P54276 AC131187.2-201ENSMUST00000223936 994 ntBASIC8.88□□□□□ -0.99
Msh6P54276 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Msh6P54276 Gm24032-201ENSMUST00000083932 159 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Msh6P54276 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Msh6P54276 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Msh6P54276 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Msh6P54276 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Msh6P54276 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Msh6P54276 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.88□□□□□ -0.99
Msh6P54276 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.88□□□□□ -0.99
Msh6P54276 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Msh6P54276 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.88□□□□□ -0.99
Msh6P54276 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.88□□□□□ -0.99
Msh6P54276 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Msh6P54276 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 Gm4152-201ENSMUST00000172675 259 ntBASIC8.87□□□□□ -0.99
Msh6P54276 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.87□□□□□ -0.99
Msh6P54276 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.87□□□□□ -0.99
Msh6P54276 Gm27972-201ENSMUST00000184720 137 ntBASIC8.87□□□□□ -0.99
Msh6P54276 Gm28996-201ENSMUST00000190316 721 ntBASIC8.87□□□□□ -0.99
Msh6P54276 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms