Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm23007-201ENSMUST00000158951 177 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Gm26784-201ENSMUST00000181666 410 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Mir7235-201ENSMUST00000183796 56 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.76□□□□□ -1.33
Sox3P53784 Gm18699-201ENSMUST00000190713 243 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.76□□□□□ -1.33
Sox3P53784 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.76□□□□□ -1.33
Sox3P53784 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.76□□□□□ -1.33
Sox3P53784 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox3P53784 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox3P53784 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox3P53784 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox3P53784 Gm5528-201ENSMUST00000076314 480 ntBASIC6.76□□□□□ -1.33
Sox3P53784 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sox3P53784 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Sox3P53784 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.76□□□□□ -1.33
Sox3P53784 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.76□□□□□ -1.33
Sox3P53784 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox3P53784 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.75□□□□□ -1.33
Sox3P53784 Gm42648-201ENSMUST00000200774 2505 ntBASIC6.75□□□□□ -1.33
Sox3P53784 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Gm22781-201ENSMUST00000104083 137 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.75□□□□□ -1.33
Sox3P53784 Gm11416-201ENSMUST00000119111 863 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Sox3P53784 Gm13430-201ENSMUST00000121366 288 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC6.75□□□□□ -1.33
Sox3P53784 Gm26169-201ENSMUST00000158420 135 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Mir6403-201ENSMUST00000185007 129 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.75□□□□□ -1.33
Sox3P53784 Gm37177-201ENSMUST00000193768 417 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Gm34768-201ENSMUST00000193884 565 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Gm7804-202ENSMUST00000194187 854 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.75□□□□□ -1.33
Sox3P53784 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.75□□□□□ -1.33
Sox3P53784 Gm44896-201ENSMUST00000206190 772 ntBASIC6.75□□□□□ -1.33
Sox3P53784 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Gm2754-201ENSMUST00000223383 589 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Sox3P53784 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox3P53784 Mir484-201ENSMUST00000093566 67 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sox3P53784 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Sox3P53784 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sox3P53784 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.75□□□□□ -1.33
Sox3P53784 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Sox3P53784 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Sox3P53784 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox3P53784 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.75□□□□□ -1.33
Sox3P53784 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox3P53784 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.74□□□□□ -1.33
Sox3P53784 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox3P53784 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms