Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Shmt1P50431 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Shmt1P50431 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 AC154482.1-201ENSMUST00000223248 2483 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm26419-201ENSMUST00000104272 133 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 n-R5s172-201ENSMUST00000104508 114 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm15081-201ENSMUST00000119794 844 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm14746-201ENSMUST00000120309 741 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm12477-201ENSMUST00000121221 571 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.51□□□□□ -1.21
Shmt1P50431 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm22728-201ENSMUST00000158087 129 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm16113-201ENSMUST00000159629 372 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm27014-201ENSMUST00000182658 937 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm18699-201ENSMUST00000190713 243 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm38030-201ENSMUST00000192376 475 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm5050-201ENSMUST00000197164 775 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.51□□□□□ -1.21
Shmt1P50431 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm45845-201ENSMUST00000207326 582 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
Shmt1P50431 CT025538.2-201ENSMUST00000226083 772 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm5528-201ENSMUST00000076314 480 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm10108-201ENSMUST00000078246 319 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm23054-201ENSMUST00000082804 162 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Shmt1P50431 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Shmt1P50431 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Shmt1P50431 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.51□□□□□ -1.21
Shmt1P50431 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm37321-201ENSMUST00000195742 1872 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.5□□□□□ -1.21
Shmt1P50431 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm25498-201ENSMUST00000104424 129 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm14869-201ENSMUST00000119007 884 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm25295-201ENSMUST00000122794 306 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm26321-201ENSMUST00000157740 242 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm25989-201ENSMUST00000158761 133 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm24111-201ENSMUST00000175491 97 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm4373-201ENSMUST00000178571 556 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm8245-201ENSMUST00000182434 987 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Mir6908-201ENSMUST00000184056 63 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm30517-201ENSMUST00000197350 772 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm43212-201ENSMUST00000198208 394 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm18330-201ENSMUST00000199246 547 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm18907-201ENSMUST00000209719 932 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms