Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col1a1P11087 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
Col1a1P11087 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.16□□□□□ -1.1
Col1a1P11087 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 AC165260.6-206ENSMUST00000223884 3698 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Gm2065-201ENSMUST00000194697 2757 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.15□□□□□ -1.1
Col1a1P11087 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Col1a1P11087 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Col1a1P11087 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Col1a1P11087 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.15□□□□□ -1.1
Col1a1P11087 Gm14614-201ENSMUST00000119873 384 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Gm15502-201ENSMUST00000121449 208 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Gm17048-201ENSMUST00000179266 847 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Mir6971-201ENSMUST00000183497 63 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Gm28918-201ENSMUST00000188822 699 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC8.15□□□□□ -1.1
Col1a1P11087 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Gm43233-201ENSMUST00000200491 616 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Gm7554-201ENSMUST00000202282 574 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 Gm18851-201ENSMUST00000210087 1058 ntBASIC8.15□□□□□ -1.1
Col1a1P11087 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Col1a1P11087 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col1a1P11087 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col1a1P11087 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col1a1P11087 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col1a1P11087 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col1a1P11087 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.15□□□□□ -1.11
Col1a1P11087 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col1a1P11087 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col1a1P11087 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.15□□□□□ -1.11
Col1a1P11087 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
Col1a1P11087 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col1a1P11087 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col1a1P11087 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Col1a1P11087 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col1a1P11087 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC8.14□□□□□ -1.11
Col1a1P11087 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Col1a1P11087 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Col1a1P11087 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Gm7113-201ENSMUST00000120477 958 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Gm23674-201ENSMUST00000157473 131 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Gm6055-201ENSMUST00000180532 378 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Gm27005-201ENSMUST00000182783 921 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.14□□□□□ -1.11
Col1a1P11087 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Gm43689-201ENSMUST00000195951 427 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Igkv4-73-201ENSMUST00000199760 358 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Gm44911-201ENSMUST00000208436 1062 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.14□□□□□ -1.11
Col1a1P11087 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Gm26442-201ENSMUST00000082588 153 ntBASIC8.14□□□□□ -1.11
Col1a1P11087 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Col1a1P11087 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Col1a1P11087 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col1a1P11087 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col1a1P11087 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Col1a1P11087 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms