Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.17■□□□□ 0.34
Cldn6Q9Z262 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Cldn6Q9Z262 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.15■□□□□ 0.34
Cldn6Q9Z262 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn6Q9Z262 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cldn6Q9Z262 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn6Q9Z262 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn6Q9Z262 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn6Q9Z262 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Gm15039-201ENSMUST00000118914 875 ntBASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn6Q9Z262 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms