Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn9Q9Z0S7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Nespas-201ENSMUST00000143738 1083 ntBASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.63■□□□□ 0.41
Cldn9Q9Z0S7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn9Q9Z0S7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 AV356131-201ENSMUST00000206201 750 ntBASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cldn9Q9Z0S7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 Gm18284-201ENSMUST00000172604 624 ntBASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn9Q9Z0S7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn9Q9Z0S7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn9Q9Z0S7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Cldn9Q9Z0S7 Grk6-206ENSMUST00000224995 2971 ntBASIC17.58■□□□□ 0.41
Cldn9Q9Z0S7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.58■□□□□ 0.41
Cldn9Q9Z0S7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn9Q9Z0S7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn9Q9Z0S7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn9Q9Z0S7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms