Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm45906-201ENSMUST00000208911 1430 ntBASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 BC021767-201ENSMUST00000126387 1716 ntBASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 AC153881.1-201ENSMUST00000214448 284 ntBASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Gm9194-201ENSMUST00000220749 1447 ntBASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcb1Q9Z0H3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smarcb1Q9Z0H3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcb1Q9Z0H3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Mir1199-201ENSMUST00000117015 119 ntBASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Mtag2-201ENSMUST00000058665 714 ntBASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcb1Q9Z0H3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Gm15375-201ENSMUST00000119510 849 ntBASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcb1Q9Z0H3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcb1Q9Z0H3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms