Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx9Q9WUH2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx9Q9WUH2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx9Q9WUH2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx9Q9WUH2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lhx9Q9WUH2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx9Q9WUH2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx9Q9WUH2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx9Q9WUH2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Gm27275-201ENSMUST00000184318 272 ntBASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx9Q9WUH2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Lhx9Q9WUH2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Gm2559-201ENSMUST00000201323 363 ntBASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx9Q9WUH2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx9Q9WUH2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx9Q9WUH2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Lhx9Q9WUH2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx9Q9WUH2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx9Q9WUH2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms