Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps29Q9QZ88 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Grk6-206ENSMUST00000224995 2971 ntBASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Gm42642-201ENSMUST00000200683 355 ntBASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Gm10033-202ENSMUST00000211874 928 ntBASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Gm18671-201ENSMUST00000214826 683 ntBASIC17.54■□□□□ 0.4
Vps29Q9QZ88 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.54■□□□□ 0.4
Vps29Q9QZ88 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps29Q9QZ88 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Gm6420-201ENSMUST00000193885 723 ntBASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Gm5874-201ENSMUST00000096101 508 ntBASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps29Q9QZ88 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps29Q9QZ88 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps29Q9QZ88 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps29Q9QZ88 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.52■□□□□ 0.4
Vps29Q9QZ88 Gm7514-201ENSMUST00000209475 934 ntBASIC17.52■□□□□ 0.4
Vps29Q9QZ88 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.52■□□□□ 0.4
Vps29Q9QZ88 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps29Q9QZ88 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.52■□□□□ 0.4
Vps29Q9QZ88 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps29Q9QZ88 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps29Q9QZ88 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Vps29Q9QZ88 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.52■□□□□ 0.39
Vps29Q9QZ88 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps29Q9QZ88 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.51■□□□□ 0.39
Vps29Q9QZ88 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vps29Q9QZ88 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Nespas-201ENSMUST00000143738 1083 ntBASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps29Q9QZ88 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps29Q9QZ88 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps29Q9QZ88 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps29Q9QZ88 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps29Q9QZ88 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps29Q9QZ88 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps29Q9QZ88 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms