Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
OtofQ9ESF1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
OtofQ9ESF1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.26■□□□□ 0.51
OtofQ9ESF1 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.26■□□□□ 0.51
OtofQ9ESF1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.26■□□□□ 0.51
OtofQ9ESF1 BC021767-201ENSMUST00000126387 1716 ntBASIC18.26■□□□□ 0.51
OtofQ9ESF1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.26■□□□□ 0.51
OtofQ9ESF1 Gm38285-201ENSMUST00000192928 922 ntBASIC18.26■□□□□ 0.51
OtofQ9ESF1 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.26■□□□□ 0.51
OtofQ9ESF1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
OtofQ9ESF1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.25■□□□□ 0.51
OtofQ9ESF1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
OtofQ9ESF1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
OtofQ9ESF1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Gm42545-201ENSMUST00000202755 922 ntBASIC18.24■□□□□ 0.51
OtofQ9ESF1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OtofQ9ESF1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.23■□□□□ 0.51
OtofQ9ESF1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.23■□□□□ 0.51
OtofQ9ESF1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OtofQ9ESF1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.23■□□□□ 0.51
OtofQ9ESF1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Gm43799-201ENSMUST00000201845 579 ntBASIC18.22■□□□□ 0.51
OtofQ9ESF1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
OtofQ9ESF1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
OtofQ9ESF1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Gm10138-203ENSMUST00000206952 366 ntBASIC18.22■□□□□ 0.51
OtofQ9ESF1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.22■□□□□ 0.51
OtofQ9ESF1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OtofQ9ESF1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OtofQ9ESF1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Gm37292-201ENSMUST00000192062 758 ntBASIC18.21■□□□□ 0.51
OtofQ9ESF1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
OtofQ9ESF1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.21■□□□□ 0.51
OtofQ9ESF1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
OtofQ9ESF1 Gm13836-201ENSMUST00000121159 501 ntBASIC18.21■□□□□ 0.5
OtofQ9ESF1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms