Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2aQ9DB34 Gm12933-201ENSMUST00000120203 872 ntBASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2aQ9DB34 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 Gm6211-202ENSMUST00000167849 925 ntBASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.12■□□□□ 0.65
Chmp2aQ9DB34 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Gm7290-201ENSMUST00000104990 617 ntBASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Gm13148-201ENSMUST00000118892 745 ntBASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Gm12918-201ENSMUST00000120234 636 ntBASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Gm15710-201ENSMUST00000121821 636 ntBASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Gm5075-201ENSMUST00000196916 622 ntBASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chmp2aQ9DB34 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2aQ9DB34 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.09■□□□□ 0.65
Chmp2aQ9DB34 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Chmp2aQ9DB34 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2aQ9DB34 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.09■□□□□ 0.65
Chmp2aQ9DB34 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2aQ9DB34 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2aQ9DB34 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2aQ9DB34 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2aQ9DB34 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2aQ9DB34 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2aQ9DB34 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2aQ9DB34 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2aQ9DB34 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2aQ9DB34 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2aQ9DB34 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2aQ9DB34 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 Gm5408-201ENSMUST00000197998 747 ntBASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Chmp2aQ9DB34 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms