Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.53■□□□□ 0.72
Gtf3c6Q9D8P7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.52■□□□□ 0.72
Gtf3c6Q9D8P7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c6Q9D8P7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Gtf3c6Q9D8P7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Gtf3c6Q9D8P7 Gm22325-201ENSMUST00000158904 308 ntBASIC19.52■□□□□ 0.72
Gtf3c6Q9D8P7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.52■□□□□ 0.72
Gtf3c6Q9D8P7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c6Q9D8P7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gtf3c6Q9D8P7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Gtf3c6Q9D8P7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gtf3c6Q9D8P7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Gtf3c6Q9D8P7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gtf3c6Q9D8P7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 Gm8495-201ENSMUST00000188740 694 ntBASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gtf3c6Q9D8P7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gtf3c6Q9D8P7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Gm26571-201ENSMUST00000181399 666 ntBASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gtf3c6Q9D8P7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gtf3c6Q9D8P7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gtf3c6Q9D8P7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf3c6Q9D8P7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf3c6Q9D8P7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms