Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rita1Q9D1H0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rita1Q9D1H0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rita1Q9D1H0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rita1Q9D1H0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rita1Q9D1H0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Gm11249-201ENSMUST00000117071 859 ntBASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rita1Q9D1H0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rita1Q9D1H0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Gm20760-201ENSMUST00000179197 648 ntBASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.89■□□□□ 0.29
Rita1Q9D1H0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rita1Q9D1H0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.88■□□□□ 0.29
Rita1Q9D1H0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rita1Q9D1H0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rita1Q9D1H0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.88■□□□□ 0.29
Rita1Q9D1H0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rita1Q9D1H0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rita1Q9D1H0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rita1Q9D1H0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rita1Q9D1H0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.87■□□□□ 0.29
Rita1Q9D1H0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rita1Q9D1H0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rita1Q9D1H0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Gm11927-201ENSMUST00000118472 759 ntBASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Gm13168-201ENSMUST00000121771 632 ntBASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rita1Q9D1H0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rita1Q9D1H0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rita1Q9D1H0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rita1Q9D1H0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rita1Q9D1H0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms