Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Gm13146-201ENSMUST00000118508 780 ntBASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shmt2Q9CZN7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shmt2Q9CZN7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Gm26571-201ENSMUST00000181399 666 ntBASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Fst-202ENSMUST00000223640 2612 ntBASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shmt2Q9CZN7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shmt2Q9CZN7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shmt2Q9CZN7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.42■□□□□ 0.38
Shmt2Q9CZN7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 118.8 ms