Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CYI0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CYI0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CYI0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.25■□□□□ 0.83
Q9CYI0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CYI0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Q9CYI0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CYI0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CYI0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CYI0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.25■□□□□ 0.83
Q9CYI0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q9CYI0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CYI0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CYI0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CYI0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CYI0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CYI0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CYI0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CYI0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Q9CYI0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.24■□□□□ 0.83
Q9CYI0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CYI0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q9CYI0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Q9CYI0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q9CYI0 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.23■□□□□ 0.83
Q9CYI0 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.23■□□□□ 0.83
Q9CYI0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q9CYI0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q9CYI0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.23■□□□□ 0.83
Q9CYI0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q9CYI0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Q9CYI0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CYI0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CYI0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CYI0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CYI0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CYI0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CYI0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CYI0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CYI0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q9CYI0 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.22■□□□□ 0.83
Q9CYI0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.21■□□□□ 0.83
Q9CYI0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.21■□□□□ 0.83
Q9CYI0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.21■□□□□ 0.83
Q9CYI0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CYI0 Rarb-207ENSMUST00000225921 2756 ntBASIC20.21■□□□□ 0.83
Q9CYI0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CYI0 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.21■□□□□ 0.83
Q9CYI0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CYI0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.21■□□□□ 0.83
Q9CYI0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CYI0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Q9CYI0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Q9CYI0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CYI0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q9CYI0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Q9CYI0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Q9CYI0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.2■□□□□ 0.82
Q9CYI0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CYI0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.2■□□□□ 0.82
Q9CYI0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.2■□□□□ 0.82
Q9CYI0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CYI0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CYI0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CYI0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Q9CYI0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CYI0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.2■□□□□ 0.82
Q9CYI0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q9CYI0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9CYI0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9CYI0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9CYI0 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.19■□□□□ 0.82
Q9CYI0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9CYI0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9CYI0 Gm11249-201ENSMUST00000117071 859 ntBASIC20.19■□□□□ 0.82
Q9CYI0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q9CYI0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9CYI0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9CYI0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.18■□□□□ 0.82
Q9CYI0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Q9CYI0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Q9CYI0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9CYI0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.18■□□□□ 0.82
Q9CYI0 Gm22325-201ENSMUST00000158904 308 ntBASIC20.18■□□□□ 0.82
Q9CYI0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9CYI0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Q9CYI0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9CYI0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9CYI0 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.18■□□□□ 0.82
Q9CYI0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q9CYI0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Q9CYI0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Q9CYI0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.17■□□□□ 0.82
Q9CYI0 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.17■□□□□ 0.82
Q9CYI0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q9CYI0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.17■□□□□ 0.82
Q9CYI0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q9CYI0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q9CYI0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q9CYI0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms