Protein–RNA interactions for Protein: Q9CXS0

3110018I06Rik, RIKEN cDNA 3110018I06 gene, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3110018I06RikQ9CXS0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
3110018I06RikQ9CXS0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.05□□□□□ -0.16
3110018I06RikQ9CXS0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
3110018I06RikQ9CXS0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
3110018I06RikQ9CXS0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
3110018I06RikQ9CXS0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
3110018I06RikQ9CXS0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.02□□□□□ -0.16
3110018I06RikQ9CXS0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
3110018I06RikQ9CXS0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
3110018I06RikQ9CXS0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
3110018I06RikQ9CXS0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.02□□□□□ -0.16
3110018I06RikQ9CXS0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.02□□□□□ -0.17
3110018I06RikQ9CXS0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
3110018I06RikQ9CXS0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
3110018I06RikQ9CXS0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
3110018I06RikQ9CXS0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
3110018I06RikQ9CXS0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
3110018I06RikQ9CXS0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
3110018I06RikQ9CXS0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
3110018I06RikQ9CXS0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
3110018I06RikQ9CXS0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms