Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Khdc3Q9CWU5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Gm7514-201ENSMUST00000209475 934 ntBASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Khdc3Q9CWU5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 AV356131-201ENSMUST00000206201 750 ntBASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Khdc3Q9CWU5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc3Q9CWU5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc3Q9CWU5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc3Q9CWU5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc3Q9CWU5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc3Q9CWU5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc3Q9CWU5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Khdc3Q9CWU5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc3Q9CWU5 Gm6420-201ENSMUST00000193885 723 ntBASIC17.58■□□□□ 0.4
Khdc3Q9CWU5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Khdc3Q9CWU5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Khdc3Q9CWU5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Gm15039-201ENSMUST00000118914 875 ntBASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Khdc3Q9CWU5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Nespas-201ENSMUST00000143738 1083 ntBASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Gm26571-201ENSMUST00000181399 666 ntBASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Khdc3Q9CWU5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Gm8495-201ENSMUST00000188740 694 ntBASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Khdc3Q9CWU5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Khdc3Q9CWU5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc3Q9CWU5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc3Q9CWU5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Khdc3Q9CWU5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Khdc3Q9CWU5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc3Q9CWU5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc3Q9CWU5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms