Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc40Q9CRC8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.21■□□□□ 0.5
Lrrc40Q9CRC8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Gm10033-202ENSMUST00000211874 928 ntBASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc40Q9CRC8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Gm18671-201ENSMUST00000214826 683 ntBASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Lrrc40Q9CRC8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Gm6420-201ENSMUST00000193885 723 ntBASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.18■□□□□ 0.5
Lrrc40Q9CRC8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Gm7514-201ENSMUST00000209475 934 ntBASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Lrrc40Q9CRC8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Nespas-201ENSMUST00000143738 1083 ntBASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Gm42642-201ENSMUST00000200683 355 ntBASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Gm5874-201ENSMUST00000096101 508 ntBASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lrrc40Q9CRC8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrc40Q9CRC8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms