Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cotl1Q9CQI6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cotl1Q9CQI6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cotl1Q9CQI6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.36□□□□□ -0.11
Cotl1Q9CQI6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cotl1Q9CQI6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cotl1Q9CQI6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cotl1Q9CQI6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cotl1Q9CQI6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cotl1Q9CQI6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cotl1Q9CQI6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.33□□□□□ -0.11
Cotl1Q9CQI6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cotl1Q9CQI6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cotl1Q9CQI6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cotl1Q9CQI6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cotl1Q9CQI6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cotl1Q9CQI6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cotl1Q9CQI6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Gm9959-201ENSMUST00000068277 390 ntBASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cotl1Q9CQI6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cotl1Q9CQI6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cotl1Q9CQI6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cotl1Q9CQI6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.31□□□□□ -0.12
Cotl1Q9CQI6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cotl1Q9CQI6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms