Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clcc1Q99LI2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Clcc1Q99LI2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Clcc1Q99LI2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Clcc1Q99LI2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcc1Q99LI2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Clcc1Q99LI2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcc1Q99LI2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcc1Q99LI2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clcc1Q99LI2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Gm5643-201ENSMUST00000117081 966 ntBASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.07■□□□□ 0.48
Clcc1Q99LI2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcc1Q99LI2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcc1Q99LI2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clcc1Q99LI2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcc1Q99LI2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcc1Q99LI2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcc1Q99LI2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clcc1Q99LI2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms