Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19■□□□□ 0.63
Lysmd3Q99LE3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Gm13168-201ENSMUST00000121771 632 ntBASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd3Q99LE3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd3Q99LE3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd3Q99LE3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd3Q99LE3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd3Q99LE3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.97■□□□□ 0.63
Lysmd3Q99LE3 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.97■□□□□ 0.63
Lysmd3Q99LE3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd3Q99LE3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd3Q99LE3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd3Q99LE3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Gm11249-201ENSMUST00000117071 859 ntBASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd3Q99LE3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lysmd3Q99LE3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd3Q99LE3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms