Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thumpd1Q99J36 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Gm43137-201ENSMUST00000198052 594 ntBASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thumpd1Q99J36 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Thumpd1Q99J36 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Thumpd1Q99J36 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Thumpd1Q99J36 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Thumpd1Q99J36 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Smad6-203ENSMUST00000179458 273 ntBASIC16.31■□□□□ 0.2
Thumpd1Q99J36 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.31■□□□□ 0.2
Thumpd1Q99J36 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thumpd1Q99J36 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Gm12251-201ENSMUST00000117893 792 ntBASIC16.3■□□□□ 0.2
Thumpd1Q99J36 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Thumpd1Q99J36 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms