Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha8Q91Y12 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha8Q91Y12 AV356131-201ENSMUST00000206201 750 ntBASIC17.84■□□□□ 0.45
Pcdha8Q91Y12 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha8Q91Y12 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha8Q91Y12 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdha8Q91Y12 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcdha8Q91Y12 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdha8Q91Y12 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.84■□□□□ 0.45
Pcdha8Q91Y12 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha8Q91Y12 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha8Q91Y12 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Pcdha8Q91Y12 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdha8Q91Y12 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pcdha8Q91Y12 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Pcdha8Q91Y12 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Gm7514-201ENSMUST00000209475 934 ntBASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdha8Q91Y12 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdha8Q91Y12 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdha8Q91Y12 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdha8Q91Y12 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdha8Q91Y12 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha8Q91Y12 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdha8Q91Y12 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha8Q91Y12 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.78■□□□□ 0.44
Pcdha8Q91Y12 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha8Q91Y12 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha8Q91Y12 Gm10849-201ENSMUST00000100397 618 ntBASIC17.78■□□□□ 0.44
Pcdha8Q91Y12 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha8Q91Y12 Gm6420-201ENSMUST00000193885 723 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms