Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga3Q91XY5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga3Q91XY5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhga3Q91XY5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Gm18284-201ENSMUST00000172604 624 ntBASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga3Q91XY5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga3Q91XY5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhga3Q91XY5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga3Q91XY5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhga3Q91XY5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhga3Q91XY5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhga3Q91XY5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhga3Q91XY5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Gm42642-201ENSMUST00000200683 355 ntBASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Gm18671-201ENSMUST00000214826 683 ntBASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhga3Q91XY5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms