Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb5Q91XX5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhgb5Q91XX5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb5Q91XX5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb5Q91XX5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Gm13836-201ENSMUST00000121159 501 ntBASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb5Q91XX5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Golph3-202ENSMUST00000226517 2359 ntBASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.18■□□□□ 0.5
Pcdhgb5Q91XX5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb5Q91XX5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb5Q91XX5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb5Q91XX5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhgb5Q91XX5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb5Q91XX5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb5Q91XX5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Pcdhgb5Q91XX5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb5Q91XX5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Gm37055-201ENSMUST00000191866 133 ntBASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Zfp783-201ENSMUST00000095946 670 ntBASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgb5Q91XX5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgb5Q91XX5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgb5Q91XX5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhgb5Q91XX5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb5Q91XX5 Gm10138-203ENSMUST00000206952 366 ntBASIC18.14■□□□□ 0.49
Pcdhgb5Q91XX5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb5Q91XX5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb5Q91XX5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhgb5Q91XX5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb5Q91XX5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb5Q91XX5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgb5Q91XX5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhgb5Q91XX5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgb5Q91XX5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms