Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgc3Q91XX1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Gm8969-201ENSMUST00000199694 526 ntBASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgc3Q91XX1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhgc3Q91XX1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgc3Q91XX1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhgc3Q91XX1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhgc3Q91XX1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhgc3Q91XX1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgc3Q91XX1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgc3Q91XX1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhgc3Q91XX1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgc3Q91XX1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms