Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgc5Q91XW9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhgc5Q91XW9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgc5Q91XW9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc5Q91XW9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgc5Q91XW9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhgc5Q91XW9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhgc5Q91XW9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Gm2399-201ENSMUST00000104944 225 ntBASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgc5Q91XW9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Gm37055-201ENSMUST00000191866 133 ntBASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms