Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Gm43137-201ENSMUST00000198052 594 ntBASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rab40bQ8VHP8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Gm8969-201ENSMUST00000199694 526 ntBASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab40bQ8VHP8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Gm12251-201ENSMUST00000117893 792 ntBASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.46■□□□□ 0.23
Rab40bQ8VHP8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.46■□□□□ 0.22
Rab40bQ8VHP8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Rab40bQ8VHP8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Smad6-203ENSMUST00000179458 273 ntBASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rab40bQ8VHP8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40bQ8VHP8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40bQ8VHP8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40bQ8VHP8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rab40bQ8VHP8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.44■□□□□ 0.22
Rab40bQ8VHP8 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.44■□□□□ 0.22
Rab40bQ8VHP8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40bQ8VHP8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40bQ8VHP8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab40bQ8VHP8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40bQ8VHP8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40bQ8VHP8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40bQ8VHP8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40bQ8VHP8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab40bQ8VHP8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
Rab40bQ8VHP8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms