Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Gm44771-201ENSMUST00000206975 626 ntBASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lmcd1Q8VEE1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmcd1Q8VEE1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmcd1Q8VEE1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Gm25925-201ENSMUST00000158314 306 ntBASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmcd1Q8VEE1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lmcd1Q8VEE1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lmcd1Q8VEE1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lmcd1Q8VEE1 Gm7153-201ENSMUST00000117092 455 ntBASIC19.52■□□□□ 0.72
Lmcd1Q8VEE1 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.52■□□□□ 0.72
Lmcd1Q8VEE1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lmcd1Q8VEE1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lmcd1Q8VEE1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lmcd1Q8VEE1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lmcd1Q8VEE1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Lmcd1Q8VEE1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lmcd1Q8VEE1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lmcd1Q8VEE1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Lmcd1Q8VEE1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Gm27704-201ENSMUST00000185094 107 ntBASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lmcd1Q8VEE1 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Gm28033-201ENSMUST00000184224 96 ntBASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lmcd1Q8VEE1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lmcd1Q8VEE1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms