Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Gm13234-201ENSMUST00000120010 747 ntBASIC17.56■□□□□ 0.4
Lsm1Q8VC85 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm1Q8VC85 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Lsm1Q8VC85 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm1Q8VC85 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm1Q8VC85 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm1Q8VC85 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm1Q8VC85 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm1Q8VC85 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm1Q8VC85 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm1Q8VC85 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lsm1Q8VC85 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Lsm1Q8VC85 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm1Q8VC85 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm1Q8VC85 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm1Q8VC85 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm1Q8VC85 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Lsm1Q8VC85 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.52■□□□□ 0.4
Lsm1Q8VC85 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm1Q8VC85 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm1Q8VC85 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm1Q8VC85 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm1Q8VC85 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm1Q8VC85 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm1Q8VC85 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Lsm1Q8VC85 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm1Q8VC85 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lsm1Q8VC85 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.5■□□□□ 0.39
Lsm1Q8VC85 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm1Q8VC85 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lsm1Q8VC85 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm1Q8VC85 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm1Q8VC85 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm1Q8VC85 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm1Q8VC85 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm1Q8VC85 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms