Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf8Q8VC56 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf8Q8VC56 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Gm42642-201ENSMUST00000200683 355 ntBASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Gm18671-201ENSMUST00000214826 683 ntBASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Gm9988-201ENSMUST00000069786 435 ntBASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rnf8Q8VC56 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf8Q8VC56 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf8Q8VC56 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf8Q8VC56 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf8Q8VC56 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.58■□□□□ 0.41
Rnf8Q8VC56 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rnf8Q8VC56 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf8Q8VC56 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf8Q8VC56 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf8Q8VC56 Gm7860-201ENSMUST00000121190 879 ntBASIC17.58■□□□□ 0.4
Rnf8Q8VC56 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms