Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpap2Q8VC34 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpap2Q8VC34 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.09■□□□□ 0.81
Rpap2Q8VC34 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Rpap2Q8VC34 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpap2Q8VC34 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpap2Q8VC34 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpap2Q8VC34 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.08■□□□□ 0.81
Rpap2Q8VC34 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpap2Q8VC34 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpap2Q8VC34 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpap2Q8VC34 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpap2Q8VC34 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpap2Q8VC34 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Rpap2Q8VC34 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Rpap2Q8VC34 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Gm26524-201ENSMUST00000192339 390 ntBASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Gm10602-201ENSMUST00000098239 609 ntBASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpap2Q8VC34 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Rpap2Q8VC34 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms