Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Gm10653-202ENSMUST00000139570 835 ntBASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Gm44549-201ENSMUST00000208351 577 ntBASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chrna3Q8R4G9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chrna3Q8R4G9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna3Q8R4G9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Gm20760-201ENSMUST00000179197 648 ntBASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna3Q8R4G9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chrna3Q8R4G9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Gm2559-201ENSMUST00000201323 363 ntBASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Chrna3Q8R4G9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Gm12896-201ENSMUST00000118430 226 ntBASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 BC021767-201ENSMUST00000126387 1716 ntBASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna3Q8R4G9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna3Q8R4G9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms